Showing posts with label dna barcoding. Show all posts
Showing posts with label dna barcoding. Show all posts

Monday, 27 November 2017

A genus of European paper wasps revised for the first time using integrative taxonomy


Date:  November 13, 2017
Source:  Pensoft Publishers

Summary:
The European and Mediterranean species of the paper wasp genus Polistes were recently revised. For the first time for this group, scientists applied an integrative taxonomic approach which combines traditional morphological methods with DNA barcoding. As a result, the researchers were able to identify a new species from Morocco.

The European and Mediterranean species of the paper wasp genus Polistes were recently revised by scientists at the SNSB-Zoologische Staatssammlung München (ZSM).

For the first time for this group scientists applied an integrative taxonomic approach which combines traditional morphological methods with modern DNA barcoding.

As a result, the researchers were able to identify a new species from Morocco. For this well-researched wasp group, this is an actual sensation.

The study is published in the open access journal ZooKeys.

The Munich researchers analysed more than 260 wasp specimens collected from across the study area with the help of DNA barcoding.

They managed to identify all species and determine their distribution. In addition, based on the genetic data, they were able to evaluate morphological characters for each species and created a completely new key for identification.

The wasps of the genus Polistes belong to the family Vespidae. The genus is represented by 17 species in Europe and the Mediterranean, with four species occurring in Germany. Within the genus, 13 species are social, with the queen overwintering and founding a new nest with up to 200 workers. Four species are parasitic and have no workers.


Wednesday, 1 January 2014

DNA Barcoding to Monitor Marine Mammal Genetic Diversity

Dec. 30, 2013 — Marine mammals are flagship and charismatic species, very attractive for the general public. Nowadays, they are also considered as highly relevant sentinel of the marine realm. Their presence and their welfare in an area is thought to indicate the health of the place, whereas their disappearance, their displacement, or a decrease in their abundance or health could reflect negative environmental changes, whether of anthropogenic origin or not.

Monitoring marine mammal biodiversity is often difficult to perform. If some species can be easily observed, others are more difficult to detect, because for instance, of their scarcity or their discrete behavior. One of the solution suggested by scientists is based on the organization of stranding networks, listing and recording marine mammal strandings, which represent a cost-effective means to follow the marine mammal biodiversity.

Tuesday, 22 May 2012

DNA Barcoding Verified the Discovery of a Highly Disconnected Crane Fly Species

ScienceDaily (May 18, 2012) — Northwestern Europe harbors one of the best known biotas, thanks to the long faunistic and floristic traditions practiced there. However, some animal groups are far better known than others. The diversity of true flies there is fascinating, and undescribed species of flies, midges and gnats are not uncommon. Because Northwestern Europe was almost totally glaciated as recently as 10 000 years ago, endemic animal species of that region are generally lacking, or are exceptions. Hence, most NW European insects and other species have colonized the area following the withdrawal of ice.


The new crane fly species Tipula recondita, is not an exception. It was found on both extremes of the vast Eurasian continent, in Northern Finland (Kittilä) as well as in the Russian Far East (Primorski kray). The description was published in the open access journal ZooKeys.

PhD candidate Jukka Salmela, working in the Zoological Museum in Turku (Finland), thinks that the new species is most likely a very rare one, because the Finnish fauna has been intensively studied during the 2000s. The rarity of the species is perhaps caused by its association with the increasinlgy rare old-growth forests and / or calcareous herb-rich forests of the taiga. Both old-growth forests with large amounts of decaying trees and northern herb-rich forests are rare habitats in Northwestern Europe.

Tuesday, 29 November 2011

New Butterfly Species ID'ed by DNA

New research into the particulars of butterfly DNA has unmasked as many as nine new butterfly species previously lumped together with known butterfly species.

The interloping butterflies, all found in Mexico's Yucatan Peninsula, have long remained incognito in the collection of El Colegio de la Frontera Sur-Chetumal (ECOSUR), a research center in Mexico. They are known as "cryptic species," because, although their markings and body types are nearly identical to previously identified butterfly species, their genes tell a different story.

"We expect all nine cryptic species will be new to science," said lead scientist Carmen Pozo, in an email.

The ECOSUR team used a technique known as DNA barcoding for their research, which is published online in the journal PLoS ONE.

By looking at the same stretch of DNA in 857 butterfly specimens in the institution's collection, the technique allowed the researchers to root out genetic differences large enough to set one species apart from another and compare the genetic sequences with a large database of known species.

In addition to identifying nine butterfly species that are likely new to science, the genetic study allowed scientists to sort 71 caterpillar specimens into 16 different species and match them with their adult counterparts — a difficult task when relying on appearance alone, since there's notoriously little resemblance between a caterpillar and its more elegant, fully grown form.

Pozo also said that following the life cycle of each species in the field is time-consuming and expensive. "Barcoding helps link the adults with caterpillars of each species in an easy, quick, cheap and accurate way," she told OurAmazingPlanet.

The researchers noted that having the ability to quickly identify which caterpillar turns into which butterfly could aid conservation efforts for threatened species and allow crucial caterpillar habitat to be identified and conserved.

The researchers also found four butterfly specimens in the collection that were incorrectly labeled as one species when, in fact, their DNA revealed they belonged to a different species altogether. Two of the newly-labeled butterflies represent new records for both the region and the country as a whole.
One of the specimens, Adelpha iphiclus, belongs to a species that has never before been seen in the Yucatan Peninsula. Another, Taygetis lache, has never before been found in all of Mexico.
All of the specimens studied belong to more than 100 different species in the Nymphalidae family, which encompasses about one-third of the 160,000 known butterfly and moth species worldwide.

The scientists noted that the revelation of the mislabeled species and the nine entirely new butterfly species adds to the evidence that many butterfly species around the world await discovery.

"This is exciting, because we are discovering new species in a well-known butterfly family," Pozo said, "which means we have more biodiversity than we thought." And yet, she said, the excitement that comes with new discovery is tempered by the fact that habitat loss is threatening several of the species.

This story was provided by OurAmazingPlanet, a sister site to LivScience. Follow OurAmazingPlanet for the latest in Earth science and exploration news on Twitter @OAPlanet and on Facebook.


http://www.livescience.com/17196-butterfly-species-uncovered-dna-barcoding.html

Saturday, 27 August 2011

Darwin's Butterflies? Spectacular Species Radiation in the Caribbean Studied With 'DNA Barcoding'

ScienceDaily (Aug. 25, 2011) — In one of the first taxonomic revisions of Neotropical butterflies that utilizes 'DNA barcoding', Andrei Sourakov (University of Florida, Florida Museum of Natural History) and Evgeny Zakharov (University of Guelph, Canadian Centre for DNA Barcoding at the Biodiversity Institute of Ontario) uncovered a spectacular degree of evolutionary divergence within the satyrine butterfly genus Calisto.

The study was published in the open-access journal Comparative Cytogenetics.

The Caribbean has a remarkable diversity of habitats and wildlife. More than 200 species of butterflies belonging to some 100 genera live on the islands, with most genera represented by a single species. Many species are endemic to the region, that is they do not occur anywhere else. This distinctive fauna apparently arose as a result of species immigrating from the mainland at some point during the islands' history, and later evolving mostly into island isolates.

The satyrine butterfly genus Calisto is the most notable of them, because it has the largest number of extant species compared to other butterfly genera found in the region. Until the present revision, Calisto had comprised 54 named taxa, which occupy an extremely diverse array of habitats, suggestive of adaptive radiation on the scale of other classic examples, such as the Galápagos or Darwin's finches.

The authors of the study applied a new set of molecular characters to clarify the classification and evolution of Calisto butterflies. The 'DNA barcoding' technique is based on the analysis of short, standardized gene region within mitochondrial DNA, and provides an efficient method for species identification. As a result, Calisto now contains 34 species and 17 subspecies and new data shed light on the general evolutionary history of the genus.

The discovered spectacular degree of DNA divergence suggests a diversification period of 4-8 million years. Species of Calisto that occur only in Puerto Rico, Cuba, and Jamaica were found likely to have evolved from various Hispaniolan ancestors. The study found no support for previously advocated theories of evolution through geographic separation events due to plate tectonics. The evolutionary time-frame and the phylogenetic position of non-Hispaniolan taxa suggest that ancient dispersal events from Hispaniola to other islands and adaptive radiation within Hispaniola are likely responsible for the diversification within the genus Calisto.
http://www.sciencedaily.com/releases/2011/08/110825102245.htm
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