Showing posts with label virus. Show all posts
Showing posts with label virus. Show all posts

Monday, 11 February 2019

Star pupils: students inspire key study on alarming starfish decline


Virus outbreak among sea stars coincided with warm waters, researchers found after sixth graders held fundraiser for survey
Emily Holden in Washington
Wed 30 Jan 2019 19.00 GMTLast modified on Thu 31 Jan 2019 16.05 GMT
Five years ago, a sixth grade class in land-locked Arkansas heard about a mass die-off of starfish on the west coast and felt compelled to help.
The 11- and 12-year-olds elected a chairman to head their fundraiser. They cut out paper starfish – more formally known as sea stars – and put them up for “adoption” for a $1 donation. They assigned them names and personality traits, such as Cherry Bomb, who “loves hanging out on her phone”, “rocks the legging style” and “is really smart but isn’t a nerd”. They sold T-shirts that read: “Save the Starfish.”
“We don’t have an ocean anywhere close by,” their now retired teacher Vickie Bailey said. “The students knew that they would never go to the coast, they would probably never get to see this type of starfish, but they were so passionate about what was happening.”



Monday, 4 February 2019

A tale of two turtles: A mystery virus has devastated Australia’s Bellinger River snapping turtles – but that's not the only threat. – via Herp Digest



Cosmos, The Science of Everything by Dyani Lewis 1/14/19


It was a warm February evening in 2015 and Sydney’s Taronga Zoo had emptied of visitors for the day. But behind closed gates, Karrie Rose and her team were gearing up for a long night. Their task: to find out what was killing the rare Bellinger River snapping turtle (Myuchelys georgesi).

Two days earlier, the NSW Office of Environment and Heritage (OEH) had launched an investigation following reports from kayakers of sick and dead turtles. Whatever had turned their home, five hours’ drive north of Sydney, into a killing field looked like it could push the species to extinction in a matter of weeks.

The 20 snapping turtles that landed on Rose’s doorstep were blinded and covered in ulcers, emaciated and lethargic. Their prognosis was grim.

“It was really dramatic,” said Rose, head wildlife vet at the Australian Registry of Wildlife Health at Taronga Conservation Society. “I’d never seen anything that acted that quickly in the wild.”

Into the early hours of the morning, Rose and her team measured, photographed and dissected the turtles to glean as much information as they could about the mysterious illness that was leaving two other species of turtle in the river unscathed.

The disease, Rose thought, had all the hallmarks of an infection. “It was highly inflammatory,” she said, “so it really suggested that there was an infectious agent in there.” Finding no signs of bacteria, fungi or parasites, she narrowed her focus to ranavirus, which had been implicated in mass mortality events in other turtle populations.

To test her hunch, and every other possibility, diagnostic and research labs around the country were enlisted to assist in the reptilian whodunit. As a result, ranavirus and an array of other known diseases were quickly ruled out.

One of the recipients of turtle blood, snot and body organs was Peter Kirkland, an animal virologist at the Elizabeth Macarthur Agricultural Institute in Menangle, an hour south-west of Sydney. Within weeks, Kirkland’s team had coaxed viral particles to blossom in flasks of cells inoculated with diseased turtle tissue. From the virus-laden flasks, they were able to extract and then sequence the virus’s genetic essence – its nucleic acids.

Kirkland not only discovered that the virus was completely new to science, he also was able to fashion a rapid diagnostic test for the illness, now known as Bellinger River Virus. To check that it was the virus that was making the turtles sick, his team tested the tissue samples Rose had sent him. Some samples, he said, had “extremely large quantities of the virus”.

The test quickly became a central tool in parallel efforts set in motion just days after the first reports of dying turtles came in. The goal was to prevent annihilation of the remaining snapping turtles and save the species from extinction.

During the rescue mission, coordinated by a recovery team at the OEH, park rangers and biologists scoured the turtle’s habitat. As the death toll climbed to several hundred – a devastating blow to a population of only a few thousand – 17 healthy looking turtles were spirited away to hastily constructed quarantine facilities at Western Sydney University, under the care of turtle ecologist Ricky Spencer.

The turtles remained healthy, and Kirkland’s diagnostic test eventually confirmed they were free of the virus that he’d isolated in his lab. Also virus free are 53 turtle hatchlings – and counting. The medallion-sized youngsters are the products of an unexpectedly successful captive breeding program established at Taronga Zoo with 16 of the survivors.

“They are the future for these animals,” said Adam Skidmore, a reptile keeper who oversees the Taronga program. A second insurance population also has been established at Symbio Wildlife Park in Helensburgh, about 45 kilometres south of Sydney’s CBD.

While the turtles thrive in their artificial ponds – away from hungry foxes, and with a plentiful supply of food – the future of the snapping turtle back in its home hangs in the balance. Nobody can say where the virus came from – “the million dollar question,” said Kirkland – or whether it lingers still in the waters of the Bellinger.

Regardless, the OEH recovery team is already gearing up to release 10 of Skidmore’s turtles into the Bellinger River this summer, where they will be periodically tested for signs of the virus.

They won’t be alone. In a bizarre twist, biologists monitoring the river discovered that the virus took out virtually all the adults but left juvenile turtles unharmed. “Were they infected, or were they just not exposed?” asked Rose. Kirkland is working on a test to answer that question.

If it turns out that juveniles can withstand infection and develop immunity, then careful inoculation of youngsters prior to release could safeguard them against future outbreaks.

Protecting the population will require more than just ensuring the river is disease free. It’s likely that other factors – droughts sparked by climate change, say, or a diminishing food supply – helped create a “perfect storm” that led to the outbreak being so deadly. “It’s rarely just one thing,” said Rose, who has seen an uptick in wildlife outbreaks in recent years. “It’s a trend that’s happening globally.”

Devastating disease isn’t the only threat to the survival of the species. Another, and perhaps more immediate danger comes from one of its close relatives, the Murray River short-necked turtle (Emydura macquarii). Since the outbreak, this interloper has thrived in the Bellinger River – more so, perhaps, than in its native habitat west of the Great Dividing Range, where its populations are dwindling.

The two turtles can interbreed to produce genetic hybrids. That’s bad news for the snapping turtle, because repeated hybridisation with the now abundant short-necked turtles could send it down a slow path to oblivion.

Decisions will need to be made quickly. Juveniles in the Bellinger River are approaching their breeding age of eight-to-ten years, so working out how to manage the short-necked turtles will be “critical”, says Gerry McGilvray, who heads snapping turtle recovery efforts at the OEH. She’s convening an expert workshop early in 2019 to come up with a plan.

For Spencer, the solution, from an ecological point of view, is a no-brainer: “You take [the short-necked turtles] out and euthanase them.” But, he says, with a public that’s often loath to kill any wildlife – introduced or otherwise – “conservation biology is a little bit more than just ecology”.


Friday, 19 January 2018

Don't Touch the Monkeys! Florida Macaques Carry Virus Lethal to Humans


By Mindy Weisberger, Senior Writer | January 11, 2018 01:42pm ET

Monkeys infected with the herpes B virus may be symptom-free, but in people the virus can be fatal.

Visitors to Florida's Silver Springs State Park should avoid monkeying around with the reserve's feral macaques; officials warn that the primates carry a strain of the herpes virus that can be fatal to humans.

About 175 free-roaming rhesus macaques (Macaca mulatta) inhabit the park, descended from a population of around a dozen animals that were released in the 1930s to promote local tourism. Hundreds more of the macaques can be found wandering the areas adjacent to the park.

Now, researchers from the Centers for Disease Control and Prevention (CDC) report that about 25 percent of the monkeys carry macacine herpesvirus 1 (McHV-1), which causes only mild symptoms, if any, in monkeys but can be deadly in people. [10 Deadly Diseases That Hopped Across Species]

The scientists also discovered that as many as 14 percent of the monkeys shed DNA from the virus in their saliva, presenting a risk of virus transmission to humans, the researchers reported in a new study, which was published online in the February 2018 issue of the journal Emerging Infectious Diseases.

Monday, 21 August 2017

Frogs that adapt to pesticides are more vulnerable to parasites


Wood frogs that develop pesticide tolerance become more susceptible to dangerous virus

Date: August 15, 2017
Source: Rensselaer Polytechnic Institute

Summary:
Amphibians can evolve increased tolerance to pesticides, but the adaptation can make them more susceptible to parasites, according to a team of scientists.

Thursday, 13 October 2016

Virus carrying DNA of black widow spider toxin discovered


Date: October 11, 2016
Source: Vanderbilt University

A tiny virus that may sting like a black widow spider.

That is one of the surprise discoveries made by a pair of Vanderbilt biologists when they sequenced the genome of a virus that attacks Wolbachia, a bacterial parasite that has successfully infected not only black widow spiders but more than half of all arthropod species, which include insects, spiders and crustaceans.

"Discovering DNA related to the black widow spider toxin gene came as a total surprise because it is the first time that a phage -- a virus that infects bacteria -- has been found carrying animal-like DNA," said Associate Professor of Biological Sciences Seth Bordenstein. He and Senior Research Specialist Sarah Bordenstein reported the results of their study in a paper titled "Eukaryotic association module in phage WO genomes from Wolbachia" published Oct. 11 in the journal Nature Communications.

Normally phages, like the WO phage that they studied, carry specialized genes that break open and defeat the defenses of the prokaryotic bacterial cells they target. But in this case, "the portion of DNA related to the black widow spider toxin gene is intact and widespread in the phage," said Bordenstein. "There is also evidence that the phage makes insecticidal toxins, but we are not certain yet how these are utilized and administered."

The scientists also found that WO shares a number of other segments of DNA with animal genomes. These include a sequence that the eukaryotic cells found in animals use to sense pathogens, which is also involved in triggering cell death. In addition, there were several genes that the cells use to evade immune responses. "These sequences are more typical of eukaryotic viruses, not phages," Bordenstein commented.

Thursday, 9 July 2015

New Squirrel Virus Strain Suspected in Deaths of 3 in Germany

by Rachael Rettner, Senior Writer | July 08, 2015 05:33pm ET

Three people in Germany who worked as squirrel breeders and who all died from brain inflammation may have contracted a new strain of virus from their squirrels, according to a new report of the cases.

The new virus strain belongs to a group of viruses called bornaviruses, which typically infect animals such as horses, sheep and birds. Researchers have debated whether this group of viruses can cause disease in people.

The new findings suggest such viruses do cause disease, and moreover, raise the question of whether this virus "represents an emerging threat" to people in the area, according to a recent statement from the European Centre for Disease Prevention and Control.

Tuesday, 18 November 2014

Virus devastating sea stars on Pacific Coast identified

Museum biological collections are the records of life on Earth and as such, they are frequently used to investigate serious environmental issues. When public health officials were concerned about the levels of mercury in fish and birds, for example, scientists studied museum specimens to assess historical changes in mercury contamination. Eggs in museum collections were analyzed to establish the connection between DDT, thinning eggshells, and the decline in bird populations. And now, specimens from the Natural History Museum of Los Angeles County (NHM) have helped explain the mysteriously sudden appearance of a disease that has decimated sea stars on the North American Pacific Coast.

In a paper published Monday, November 17, 2014 in the journal Proceedings of the National Academy of Sciences, Cornell University microbiologist Ian Hewson and colleagues identify the Sea Star Associated Densovirus (SSaDV) virus as the microbe responsible for Sea Star Wasting Disease (SSWD). NHM Curator of Echinoderms Gordon Hendler and Collections Manager Cathy Groves, along with scientists from universities and aquariums along the coast (including NHM neighbor, the California Science Center), collaborated in the study.

Wednesday, 30 July 2014

Frog Population Decline Linked to Killer Pathogen

Jacqueline Conciatore, National Science Foundation | July 28, 2014 02:06pm ET

A virus lethal to wood frog tadpoles may be partly responsible for the alarming and widespread extinction of amphibians seen in recent decades.

The study from the NSF-funded National Institute for Mathematical and Biological Synthesis (NIMBioS) showed that ranavirus, a killer pathogen that causes frogs' internal organs to bleed profusely, could lead to the extinction of isolated populations of wood frogs. "We looked at isolated populations because we wanted to know if it was at all possible that ranavirus could cause extinctions, and isolated populations were the most likely," said lead researcher and NIMBioS postdoctoral fellow Julia Earl.


Monday, 5 May 2014

Virus Has Reportedly Wiped Out One-Tenth Of The US Pig Population

May 3, 2014

redOrbit Staff & Wire Reports – Your Universe Online

Expect pork prices to soar, possibly to record highs, after an ailment known as Porcine Epidemic Diarrhea virus (PEDv) has wiped out a reported seven million pigs in the US, or up to 10 percent of the country’s population.

According to Reed Karaim of National Geographic, the National Pork Producers Council (NPPC) estimated that PEDv has already wiped out one-tenth of all American pigs, while the USDA estimates are lower (five to seven percent).

Adult pigs typically recover from the condition in a matter of days, Karaim said, and once mothers build up a resistance to PEDv they pass it on to their offspring. However, that process can take up to a month, and many newborn piglets succumb in the meantime – a situation that NPPC president Howard Hill called “heartbreaking.”

Fortunately, health experts said that the disease is unlikely to be harmful to humans. The disease, which was first discovered in the UK in 1971, has not yet made the jump to any other species. However, while extremely unlikely, zoonotic virus specialists told National Geographic that human PEDv infection is not completely impossible.

Juergen Richt, a professor of veterinary medicine at Kansas State University, told Karaim that the disease “has been around for more than 40 years” and that “there has been no evidence that anyone working with the pigs in any of that time has caught the disease.”

Likewise, Christopher Olsen, a professor of public health at the University of Wisconsin, added that there is “no evidence” that PEDv “poses a risk to people, and there is no evidence of any human infection.” Since the virus attacks the gastrointestinal tracts of pigs and not the meat, he added that there is “absolutely no reason not to continue eating pork.”





Concerns grow in Europe over threat from deadly pig virus

By Matt McGrath
Environment correspondent, BBC News

The virus has proved to be particularly deadly for young pigs

France is expected to suspend pig-related imports from a number of countries as worries grow over the spread of a deadly swine virus.

Porcine Epidemic Diarrhoea Virus (PEDv) has killed some seven million piglets in the US in the past year.

The disease has also been found in Canada, Mexico and Japan.

While the virus isn't harmful to humans or food, France is concerned over the potential economic impact and is set to suspend imports of live pigs and sperm.

PEDv is spread in faecal matter and attacks the guts of pigs, preventing them from absorbing liquids and nutrients.

Older animals can survive but fatality rates among piglets run between 80% and 100%.

So virulent is the agent that one expert estimated that a spoonful of infected manure would be enough to sicken the entire US herd.

Friday, 7 March 2014

Giant, 30,000-year-old virus Pithovirus sibericum reborn from Siberian permafrost

Updated Tue 4 Mar 2014, 10:41am AEDT

French scientists say they have revived a giant but harmless virus that had been locked in the Siberian permafrost for more than 30,000 years.

Wakening the long-dormant virus serves as a warning that unknown pathogens entombed in frozen soil may be roused by global warming, they said.

The virus, Pithovirus sibericum, was found in a 30-metre-deep sample of permanently frozen soil taken from coastal tundra in Chukotka, near the East Siberia Sea, where the average annual temperature is -13.4 degrees Celsius.

The team thawed the virus and watched it replicate in a culture in a petri dish, where it infected a simple single-cell organism called an amoeba.

Thursday, 17 October 2013

Innate Virus-Killing Power Discovered in Mammals

Oct. 10, 2013 — Scientists have a promising new approach to combating deadly human viruses thanks to an educated hunch by University of California, Riverside microbiology professor Shou-Wei Ding, and his 20 years of research on plants, fruit flies, nematodes and mice to show the truth in his theory.

Researchers led by Ding, who heads a lab in UC Riverside's Institute for Integrative Genome Biology, have discovered that, like plants and invertebrate animals, mammals use the RNA interference (RNAi) process to destroy viruses within their own cells.

Their findings will be published in the Oct. 11 issue of the journal Science.

Until now, scientists were unable to prove that mammals use RNAi for killing viruses, but ironically, it was Ding's earlier research into plants, nematodes and fruit flies that helped him find the key: viruses have been outwitting that innate protection in our cells by using proteins to suppress our virus-killing mechanism.

Remove the suppressor protein from the virus, Ding's research discovered, and the subject's body will quickly eliminate the virus using the RNAi process, which sends out small interfering RNAs (siRNAs) to kill the disease.

In their research on young mice, for instance, all the subjects died when they were infected with the Nodamura virus, but when Ding's researchers removed the suppressor protein called B2 from the virus, the infected mice began producing huge armies of the virus-attacking siRNAs and lived, unaffected by the otherwise lethal infection.

"Many have tried to do this, that is, find the viral siRNAs in mammals, but they could not find the key," said Ding. "The key was our prior knowledge of the B2 protein in the Nodamura virus, a virus few people know about. Other scientists asked me, 'What is the Nodamura virus?' They have been studying the more well-known human viruses, but Nodamura virus infection of mice proves to be the best model."

Wednesday, 24 July 2013

Never-before-seen GIANT virus found that's so unusual it may have come from Mars

The Pandoravirus is one micrometre big - ten times the size of other viruses
It is found underwater but is not considered a threat to humans
The virus has been spotted off the coast of Chile and in an Australian pond
Only six per cent of its genes resemble those seen before on Earth

Scientists have found a new virus thought to be the biggest ever seen on Earth. 

The virus, dubbed Pandoravirus, is one micrometre big - up to ten times the size of other viruses - and only six per cent of its genes resemble anything seen on Earth before. 

This has led French researchers to believe the virus may have come from an ancient time or even another planet, such as Mars.The giant virus is only found underwater and is not thought to pose a serious risk to humans.

However, the researchers, who published their findings in the journal Science, believe that the virus opens up a range of questions about the history of life on Earth.

Dr Jean-Michel Claverie of Aix-Marseille University in France, who found the virus, told NPR: ‘We believe that these new Pandoraviruses have emerged from a new ancestral cellular type that no longer exists.’

Thursday, 20 December 2012

Virus-Host Co-Evolution: How Specialized Should a Strain of a Multi-Host Virus Be?


Dec. 11, 2012 — A new study of canine distemper virus (CDV) provides the first evidence that the virus occurs as specialist strains that emerge in response to strong evolutionary selection in the large global domestic dog population, and as generalist strains adapted to infect a broad range of carnivore species that occur as smaller host populations. The study not only unravelled one key mechanism which led to the evolution of specialist and generalist strains, it also showed that specialising on one host species comes at the cost of a reduced ability to infect other host species.

Scientists from the Leibniz Institute for Zoo and Wildlife Research (IZW), the Freie Universität Berlin and the University of Göttingen in Germany, the INRS-Institut Armand-Frappier in Canada and Cornell University in USA investigated the 'lock and key' mechanism used by the canine distemper virus (CDV) to gain entry into host cells. In the case of CDV, this mechanism involves the binding of a specific protein of the virus (the CDV haemagglutinin protein, CDV-H) to a specific receptor molecule on the host cell (the signalling lymphocytic activation molecule, SLAM). The authors investigated differences between SLAM receptors in wild and domestic carnivore species. This revealed that SLAM receptors from different species in the dog family (Canidae) were quite similar but that they differed substantially from those of species in other carnivore families such as the cats (Felidae), hyenas (Hyaenidae), martens (Mustelidae), seals (Phocidae) and walruses (Odobenidae). "As the configuration of the 'lock' on the host cell varies considerably between dogs and their close relatives on the one hand and carnivores from other families on the other, we expected that the 'key' used by different strains of CDV to gain entry to host cells would also show variation. Viruses constantly adapt to improve their ability to infect their different host species" comments Klaus Osterrieder (FU Berlin).


Monday, 17 December 2012

Emerging Virus in Raccoons May Provide Cancer Clues


Dec. 12, 2012 — Rare brain tumors emerging among raccoons in Northern California and Oregon may be linked to a previously unidentified virus discovered by a team of researchers, led by scientists from the University of California, Davis. Their findings, published December 12 in the journal Emerging Infectious Diseases, could lead to a better understanding of how viruses can cause cancer in animals and humans.

Necropsies conducted since March 2010 by scientists at the UC Davis School of Veterinary Medicine and UC Davis-led California Animal Health and Food Safety Laboratory found brain tumors in 10 raccoons, nine of which were from Northern California, the article reports. The 10th was sent to UC Davis by researchers at Oregon State University in Corvallis, Ore.
The common factor, found in all of the tumors, was a newly described virus, dubbed raccoon polyomavirus. Researchers suspect this virus contributes to tumor formation.

Polyomaviruses, which are prevalent but rarely cause cancer, do not typically cross from one species to another, so the outbreak is not expected to spread to people or other animals.

Two more raccoons with the tumor and the virus have been found in Yolo and Marin counties since September 2012, when the article was submitted to the journal for publication.

"Raccoons hardly ever get tumors," said study author Patricia Pesavento, a pathologist with the UC Davis School of Veterinary Medicine. "That's why we take notice when we get three tumors, much less 12."


Monday, 26 November 2012

New coronavirus: May be 'bat bug'


Bats may be the source of a new Sars-like virus which killed a man in Saudi Arabia, according to an analysis of the coronavirus' genome.

Two other people have been infected and one, who was flown to the UK for treatment in September, is still in intensive care.

Experts, writing in the journal mBio, said the virus was closely related to other viruses in bats.

It is thought the virus does not pass readily from one person to another.

Coronaviruses are a family of viruses ranging from the common cold to the Sars (severe acute respiratory syndrome) virus. They infect a wide range of animals.

In 2002 an outbreak of the Sars coronavirus killed about 800 people after it spread from Hong Kong to more than 30 countries around the world.

Genetic code
The new coronavirus was detected after a 60-year-old man died of pneumonia and kidney failure in Saudi Arabia in June.

A second man, who was brought to the UK from Qatar, still needs an artificial lung to stay alive.

The UK's Health Protection Agency (HPA) published the full genetic sequence of the case in London earlier this month.

Dr Ron Fouchier, from the Erasmus Medical Centre in the Netherlands, analysed the case from Saudi Arabia.

He said both cases were related, but it looked as though the men had been infected separately from animals rather than the virus being passed between people.

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